Shipud writes "We live in the post-genomic era, when DNA sequence data is growing exponentially. However, for most of the genes that we identify, we have no idea of their biological functions. They are like words in a foreign language, waiting to be deciphered. The Critical Assessment of Function Annotation, or CAFA, is a new experiment to assess the performance of the multitude of computational methods developed by research groups worldwide and help channel the flood of data from genome research to deduce the function of proteins. Thirty research groups participated in the first CAFA, presenting a total of 54 algorithms. The researchers participated in blind-test experiments in which they predicted the function of protein sequences for which the functions are already known but haven't yet been made publicly available. Independent assessors then judged their performance. The challenge organizers explain that: 'The accurate annotation of protein function is key to understanding life at the molecular level and has great biochemical and pharmaceutical implications, explain the study authors; however, with its inherent difficulty and expense, experimental characterization of function cannot scale up to accommodate the vast amount of sequence data already available. The computational annotation of protein function has therefore emerged as a problem at the forefront of computational and molecular biology.'"
DEAL: For $25 - Add A Second Phone Number To Your Smartphone for life! Use promo code SLASHDOT25. Also, Slashdot's Facebook page has a chat bot now. Message it for stories and more. Check out the new SourceForge HTML5 internet speed test! ×
theodp writes "For those students for whom it's all about the Benjamins, BusinessInsider's Alyson Shontell has compiled a nice list of 20 Tech Companies That Pay Interns Boatloads Of Money. 'If you intern for a high-profile tech company,' notes Shontell, 'you can make more money than the average US citizen. Facebook, for example, pays its average intern $6,056 per month. That ends up being a base salary of about $72,000 per year.' Sure beats making a 'measly' $5,808 per month at LinkedIn, where you might find yourself having to participate in embarrassing sing-a-longs and Flash Mobs!"
hypnosec writes "Microsoft Research has teamed up with the Technion-Israel Institute of Technology to develop software that can predict events like outbreaks of disease or violence by mining data from old news and the web. The project, if successful, will result into a tool that would provide information that is more than just educated guesses or intuition. The team consisting of Eric Horvitz from Microsoft Research and Kira Radinsky from Technion-Israel Institute tested the program with articles from New York Times spanning over 20 years from 1986-2007."
schwit1 writes "A proposal by the Prince George's County Board of Education to copyright work created by staff and students for school could mean that a picture drawn by a first-grader, a lesson plan developed by a teacher or an app created by a teen would belong to the school system, not the individual. It's not unusual for a company to hold the rights to an employee's work, copyright policy experts said. But the Prince George's policy goes a step further by saying that work created for the school by employees during their own time and using their own materials is the school system's property."
An anonymous reader writes in with news of the continuing saga of Java patches and exploits. "If you're a Mac user who suddenly can't access websites or run applications that rely on Java, you're not alone. For the second time in a month, Apple has silently blocked the latest version of Java 7 from running on OS X 10.6 Snow Leopard or higher via its XProtect anti-malware tool. Apple hasn't issued any official statements advising users of the change or its reasons, but it's a safe bet that the company has deemed Oracle's most recent update to Java insecure. That's why the company stealthily disabled Java on Macs back on Jan. 10, the same day a Java vulnerability was being exploited in the wild."
FatLittleMonkey writes "My mind to your mind... my thoughts to your thoughts... Researchers at the University of Essex have shown that combining the output from two non-invasive 'brain-computer interfaces,' computer-interpreted EEG signals, led to a much clearer signal of the subjects' intention than the output from a single subject. To test this idea, they had two subjects try to steer a simulated space-ship at a target planet, by thinking of one of eight possible directions. While a single user could achieve 67% accuracy, this jumped to 90% when two minds were combined. Researchers believe the technique also compensates for individual lapses in attention, and thus may have applications in real-world space missions."
Velcroman1 writes "Ever wonder how troops serving abroad in remote locations and even underwater might get to watch the Super Bowl? The very same highly advanced technology used to pass classified drone video feeds will be deployed this Sunday to ensure U.S. troops can see the Super Bowl — - no matter how far away from home they are. The broadcast is the result of a unique media, government and technology partnership with the American Forces Radio and Television Service, Raytheon and the U.S. Air Force. The Global Broadcast Service (GBS) may be normally used to disseminate video, images and other data, but major sporting events have been broadcast over it as well. The system will be 'as small as a laptop, and [equipment] the size of a shoebox and umbrella' yet 'in other places will be projected onto large screens in hangers' like aircraft carriers out at sea, explained Raytheon Intelligence and Information Systems' chief innovation officer Mark Bigham."
An anonymous reader writes "My company has been contacted by certified letter by Delaware law firm. They are seeking license fees for a Wi-fi patent. I believe this is a patent troll (not that this matters in relation to dealing with this issue). This is a newly formed law firm less than 4 months old. This patent is U.S. Patent No. 5,506,866. This patent covers equipment and method related to the transmission of information involving the multiplexing information into a stream of signal points (and demultiplexing the same), and related technology. They have 'offered' to license this patent with no amounts specified. Unfortunately we are a small free software company. The company is setup as a sole proprietorship. I'm not asking for legal advise from the Slashdot community. The question is where might one look for 'legal counsel' with the expertise to answer these types of legal questions as it relates to this inquiry. I would prefer to avoid legal fees, court cases, or license fees running the company into the ground. The company is registered in New Jersey."
MojoKid writes "It has been over six years since Apple introduced the iPhone. Millions of apps have been written for the platform in that time, with collective downloads into the billions. Apple's App Store is a thriving marketplace with a huge amount of software available, except Microsoft Office. There's a version of Office for iOS supposedly in the works, but Microsoft CEO Steve Ballmer threw cold water on the idea when asked about upcoming events for the Office suite after launching the new Office 2013 / Office 365 products earlier this week. Revenue sharing is reportedly a major sticking point. Microsoft is trying to push people towards yearly subscriptions with Office 2013 and Office 365, but Apple requires a 30 percent profit share on sales of any app in their store. Microsoft reportedly isn't thrilled at the idea of sharing that much revenue. It's ironic — when Bill Gates agreed to port Office to the Mac nearly 20 years ago, it was seen as a lifeline for the beleaguered manufacturer. Now, Microsoft is knocking on the door of Apple's business and Cupertino seems disinclined to answer."
An anonymous reader writes "Google is fearlessly trudging on with its Chromebook push in the education market. The company announced on Friday that there are now 2,000 schools using Chromebooks for Education around the world. Just three months ago, there were 1,000 schools, showing an impressive adoption rate so far."
littlesparkvt writes "One of two official packages of photos of Iran's famed simian space traveler depicted the wrong monkey, but a primate really did fly into space and return safely to Earth, a senior Iranian space official confirmed Saturday. The two different monkeys shown in the photos released by Iran’s state media caused some international observers to wonder whether the monkey had died in space or that the launch didn’t go well."
FatLittleMonkey writes "Researchers in Germany have developed a device that allows users of portable devices, such as smartphones, experience force-feedback from games using just their own muscles... and a small EMS device. When stimulated by a painless electric pulse, the player's arm moves the device in whichever direction the game commands. The player then fights the movement with their other muscles, creating a strong sensation that the device itself is bucking in their hands. According to the developers, users found the sensation much more realistic than traditional vibrotactile feedback. (Should make PvP more interesting too.)"
Nerval's Lobster writes "Whatever your actual feelings about football and this weekend's Super Bowl, you have to admire Wolfram Alpha's willingness to crunch any dataset and see what it can find. The self-billed 'computational knowledge engine' has analyzed the historical data for both teams involved in this Sunday's Super Bowl XLVII. Its conclusion? The San Francisco 49ers and Baltimore Ravens are 'annoyingly similar' when it comes to numbers, although some players stand out as potential game changers — if the math plays out right."
An anonymous reader writes "Joel Runyon recounts a tale that will be familiar to many people who have bought secondhand smartphones. After his old dumbphone died a few months ago, Runyon picked up a used iPhone. He just needed it for basic phone capabilities, and used it as such, turning data off. However, AT&T eventually figured out he was making calls from a smartphone, and they decided he needed a data plan, even if he wasn't going to use it. They went ahead and opted him into a plan that cost an extra $30 a month. Quoting: 'According to AT&T: They can opt me into a contract that I didn't agree to because I was using a phone that I didn't buy from them because it had the ability to use data that I wasn't using (and was turned off). To top it all off, they got the privilege of charging me for it because I bought a differently categorized device – even though the actual usage of their network did not change at all and I never reconstituted a new agreement with them.'"
JerkyBoy writes "RunRev maintains the proprietary LiveCode programming environment. Those familiar with HyperCard on the Mac would feel quite at home using the environment to produce simple applications, and possibly more, although the programming language it incorporates has a few significant shortcomings (e.g., true object orientation). But it is a very versatile environment, currently claiming support for Windows, Mac, Linux, iOS, Android, and server-side scripting. For us NOOBs who could never find the time to learn C++ and something like the wxWidgets or QT toolkits, it seems like a pretty good deal. Recently RunRev has done something interesting, however, and that is to create a Kickstarter campaign to move the environment to open source (~500K lines of code, ~700 files). The way that they describe it, it sounds like there will be a commercial version and an open-source version of the environment (hopefully not cripple-ware), and they are asking for money to do this. But I want to know: what are their chances of success with this model? How in the world can they make enough money to maintain their programmers and overhead while giving the environment away? In other words, if a company like RunRev announces that they are moving to an open-source model, should you become more interested or less interested in their product?"